Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm6244-201ENSMUST00000178732 841 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm9908-201ENSMUST00000211534 448 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm5356-201ENSMUST00000093326 615 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm11814-201ENSMUST00000119515 929 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm14928-201ENSMUST00000120198 477 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm16296-201ENSMUST00000159905 325 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm27331-201ENSMUST00000183705 60 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm36991-201ENSMUST00000191800 648 ntBASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf220Q6PDX6 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf220Q6PDX6 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm13369-201ENSMUST00000119442 987 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms