Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Krt42Q6IFX2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt42Q6IFX2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Krt42Q6IFX2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Krt42Q6IFX2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm13875-201ENSMUST00000120162 282 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm9192-201ENSMUST00000183221 985 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm27682-201ENSMUST00000183930 110 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm18018-201ENSMUST00000198273 408 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm10268-201ENSMUST00000085340 555 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt42Q6IFX2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gm12091-201ENSMUST00000146791 830 ntBASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gm6439-201ENSMUST00000199849 862 ntBASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt42Q6IFX2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
Krt42Q6IFX2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms