Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.1□□□□□ -0.15
NfkbibQ60778 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm11244-201ENSMUST00000121243 237 ntBASIC14.1□□□□□ -0.15
NfkbibQ60778 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm7504-201ENSMUST00000201449 424 ntBASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.1□□□□□ -0.15
NfkbibQ60778 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfkbibQ60778 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.1□□□□□ -0.15
NfkbibQ60778 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NfkbibQ60778 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.09□□□□□ -0.15
NfkbibQ60778 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.09□□□□□ -0.15
NfkbibQ60778 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm37299-201ENSMUST00000193951 826 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm37458-201ENSMUST00000194055 410 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm37981-201ENSMUST00000194280 535 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm5051-201ENSMUST00000204085 485 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm8285-201ENSMUST00000208293 759 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.09□□□□□ -0.15
NfkbibQ60778 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.09□□□□□ -0.15
NfkbibQ60778 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
NfkbibQ60778 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NfkbibQ60778 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NfkbibQ60778 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms