Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm14017-201ENSMUST00000121934 386 ntBASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Syne3Q4FZC9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm22133-201ENSMUST00000102082 109 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm2383-201ENSMUST00000181461 807 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm43962-201ENSMUST00000203898 190 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm8913-201ENSMUST00000209491 641 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm8385-201ENSMUST00000058999 643 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Syne3Q4FZC9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Gm11511-201ENSMUST00000118146 540 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms