Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Gm5616-201ENSMUST00000165252 384 ntBASIC13.88□□□□□ -0.19
Limch1Q3UH68 Gm8741-201ENSMUST00000174736 384 ntBASIC13.88□□□□□ -0.19
Limch1Q3UH68 Gm4607-201ENSMUST00000206649 577 ntBASIC13.88□□□□□ -0.19
Limch1Q3UH68 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.88□□□□□ -0.19
Limch1Q3UH68 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Limch1Q3UH68 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Mir7032-201ENSMUST00000185154 79 ntBASIC13.87□□□□□ -0.19
Limch1Q3UH68 Gm28071-201ENSMUST00000190355 478 ntBASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Limch1Q3UH68 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm11511-201ENSMUST00000118146 540 ntBASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm11450-201ENSMUST00000121144 333 ntBASIC13.86□□□□□ -0.19
Limch1Q3UH68 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.86□□□□□ -0.19
Limch1Q3UH68 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm9555-201ENSMUST00000200908 583 ntBASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.86□□□□□ -0.19
Limch1Q3UH68 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limch1Q3UH68 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms