Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.76□□□□□ -0.37
CiitaP79621 Gm19459-201ENSMUST00000176240 835 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Gm4654-201ENSMUST00000183305 982 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.76□□□□□ -0.37
CiitaP79621 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.76□□□□□ -0.37
CiitaP79621 Gm43186-201ENSMUST00000198130 824 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.76□□□□□ -0.37
CiitaP79621 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CiitaP79621 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CiitaP79621 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.76□□□□□ -0.37
CiitaP79621 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.76□□□□□ -0.37
CiitaP79621 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.75□□□□□ -0.37
CiitaP79621 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CiitaP79621 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.75□□□□□ -0.37
CiitaP79621 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Gm3508-201ENSMUST00000186012 792 ntBASIC12.75□□□□□ -0.37
CiitaP79621 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Gm2517-201ENSMUST00000215651 348 ntBASIC12.75□□□□□ -0.37
CiitaP79621 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CiitaP79621 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CiitaP79621 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.75□□□□□ -0.37
CiitaP79621 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CiitaP79621 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CiitaP79621 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CiitaP79621 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Gm12419-201ENSMUST00000116649 636 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Gm16166-201ENSMUST00000118291 787 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Gm7150-201ENSMUST00000122032 981 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CiitaP79621 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.74□□□□□ -0.37
CiitaP79621 Gm44126-201ENSMUST00000204831 514 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Gm9132-201ENSMUST00000210182 832 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.74□□□□□ -0.37
CiitaP79621 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.74□□□□□ -0.37
CiitaP79621 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.74□□□□□ -0.37
CiitaP79621 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.74□□□□□ -0.37
CiitaP79621 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms