Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Usp46P62069 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp46P62069 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp46P62069 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp46P62069 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp46P62069 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp46P62069 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp46P62069 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usp46P62069 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp46P62069 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Gm11511-201ENSMUST00000118146 540 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp46P62069 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Usp46P62069 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp46P62069 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Gm25881-201ENSMUST00000157783 103 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Usp46P62069 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Gm3332-201ENSMUST00000189337 928 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Gm44100-201ENSMUST00000204329 436 ntBASIC12.55□□□□□ -0.4
Usp46P62069 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp46P62069 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp46P62069 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp46P62069 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.55□□□□□ -0.4
Usp46P62069 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp46P62069 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp46P62069 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Usp46P62069 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp46P62069 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp46P62069 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp46P62069 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Gm14058-201ENSMUST00000116082 735 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm13035-201ENSMUST00000117496 342 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm15225-201ENSMUST00000120449 1017 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm12196-201ENSMUST00000120954 262 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp46P62069 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.54□□□□□ -0.4
Usp46P62069 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm43184-201ENSMUST00000197247 542 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm18893-201ENSMUST00000198416 943 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 Gm4157-201ENSMUST00000211647 679 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp46P62069 AC132384.10-201ENSMUST00000217862 1204 ntBASIC12.54□□□□□ -0.4
Usp46P62069 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp46P62069 Gm807-202ENSMUST00000224929 408 ntBASIC12.54□□□□□ -0.4
Usp46P62069 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms