Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Lim2P56563 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.76□□□□□ -0.53
Lim2P56563 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Gm14724-201ENSMUST00000118400 537 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Gm8566-201ENSMUST00000120174 465 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Lim2P56563 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.76□□□□□ -0.53
Lim2P56563 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.76□□□□□ -0.53
Lim2P56563 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Gm9192-201ENSMUST00000183221 985 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Gm2553-201ENSMUST00000215986 605 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Gm5369-201ENSMUST00000217499 588 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.76□□□□□ -0.53
Lim2P56563 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lim2P56563 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.76□□□□□ -0.53
Lim2P56563 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Lim2P56563 Gm14058-201ENSMUST00000116082 735 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm13035-201ENSMUST00000117496 342 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm11663-201ENSMUST00000117888 290 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.75□□□□□ -0.53
Lim2P56563 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm8100-201ENSMUST00000182906 988 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.75□□□□□ -0.53
Lim2P56563 Gm2965-201ENSMUST00000198365 343 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.75□□□□□ -0.53
Lim2P56563 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lim2P56563 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lim2P56563 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lim2P56563 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lim2P56563 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms