Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm14724-201ENSMUST00000118400 537 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Gm12501-201ENSMUST00000119163 529 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.14□□□□□ -0.15
Irf5P56477 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Irf5P56477 Gm43184-201ENSMUST00000197247 542 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Gm43316-201ENSMUST00000197252 1295 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Gm18711-201ENSMUST00000199341 750 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.14□□□□□ -0.15
Irf5P56477 AC129336.1-201ENSMUST00000220224 2277 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Gm10829-201ENSMUST00000202084 2988 ntBASIC14.14□□□□□ -0.15
Irf5P56477 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Irf5P56477 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.14□□□□□ -0.15
Irf5P56477 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Irf5P56477 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Irf5P56477 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Irf5P56477 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Gm42535-201ENSMUST00000197312 1399 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Irf5P56477 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Irf5P56477 Gm16397-201ENSMUST00000122201 494 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.13□□□□□ -0.15
Irf5P56477 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Mir6958-201ENSMUST00000184207 73 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Mir6546-201ENSMUST00000184460 62 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Irf5P56477 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.13□□□□□ -0.15
Irf5P56477 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Irf5P56477 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.12□□□□□ -0.15
Irf5P56477 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.12□□□□□ -0.15
Irf5P56477 Gm12196-201ENSMUST00000120954 262 ntBASIC14.12□□□□□ -0.15
Irf5P56477 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.12□□□□□ -0.15
Irf5P56477 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.12□□□□□ -0.15
Irf5P56477 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.12□□□□□ -0.15
Irf5P56477 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Irf5P56477 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Irf5P56477 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Irf5P56477 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms