Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.34□□□□□ -0.43
Ephb3P54754 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ephb3P54754 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm11244-201ENSMUST00000121243 237 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm12453-201ENSMUST00000121981 331 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ephb3P54754 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Gm24248-201ENSMUST00000157321 322 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Ephb3P54754 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ephb3P54754 Gm6450-201ENSMUST00000200896 574 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm30671-201ENSMUST00000214898 318 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ephb3P54754 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ephb3P54754 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.34□□□□□ -0.43
Ephb3P54754 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ephb3P54754 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Ephb3P54754 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.33□□□□□ -0.43
Ephb3P54754 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ephb3P54754 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ephb3P54754 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ephb3P54754 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ephb3P54754 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm11560-201ENSMUST00000117567 948 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm22379-201ENSMUST00000157480 131 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.33□□□□□ -0.44
Ephb3P54754 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Gm43380-201ENSMUST00000200421 220 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Gm7504-201ENSMUST00000201449 424 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Gm7082-201ENSMUST00000209880 969 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Gm6390-201ENSMUST00000215034 589 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.33□□□□□ -0.44
Ephb3P54754 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ephb3P54754 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.33□□□□□ -0.44
Ephb3P54754 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ephb3P54754 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ephb3P54754 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.32□□□□□ -0.44
Ephb3P54754 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ephb3P54754 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms