Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shmt1P50431 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Gm9540-201ENSMUST00000188230 478 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 Gm38314-201ENSMUST00000195709 625 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shmt1P50431 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Shmt1P50431 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Shmt1P50431 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt1P50431 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.44□□□□□ -0.42
Shmt1P50431 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shmt1P50431 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm19459-201ENSMUST00000176240 835 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm5051-201ENSMUST00000204085 485 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.43□□□□□ -0.42
Shmt1P50431 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Shmt1P50431 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt1P50431 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shmt1P50431 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shmt1P50431 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shmt1P50431 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms