Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm18514-201ENSMUST00000218980 436 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm10254-201ENSMUST00000052888 867 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Btrc-209ENSMUST00000224478 2194 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col2a1P28481 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Gm22846-201ENSMUST00000157706 270 ntBASIC13.19□□□□□ -0.3
Col2a1P28481 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Gm28833-201ENSMUST00000189671 559 ntBASIC13.19□□□□□ -0.3
Col2a1P28481 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.19□□□□□ -0.3
Col2a1P28481 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col2a1P28481 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.19□□□□□ -0.3
Col2a1P28481 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.19□□□□□ -0.3
Col2a1P28481 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col2a1P28481 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.19□□□□□ -0.3
Col2a1P28481 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col2a1P28481 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col2a1P28481 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 Gm9135-201ENSMUST00000182963 990 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 Gm9353-201ENSMUST00000200472 604 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Col2a1P28481 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.18□□□□□ -0.3
Col2a1P28481 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col2a1P28481 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col2a1P28481 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col2a1P28481 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col2a1P28481 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col2a1P28481 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col2a1P28481 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col2a1P28481 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col2a1P28481 Gm25880-201ENSMUST00000104331 132 ntBASIC13.17□□□□□ -0.3
Col2a1P28481 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col2a1P28481 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Col2a1P28481 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.17□□□□□ -0.3
Col2a1P28481 Gm9133-201ENSMUST00000118289 540 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms