Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.2□□□□□ -0.3
Gja8P28236 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.2□□□□□ -0.3
Gja8P28236 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm10169-201ENSMUST00000121822 348 ntBASIC13.2□□□□□ -0.3
Gja8P28236 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.2□□□□□ -0.3
Gja8P28236 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm5340-201ENSMUST00000203733 880 ntBASIC13.2□□□□□ -0.3
Gja8P28236 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gja8P28236 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.2□□□□□ -0.3
Gja8P28236 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gja8P28236 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gja8P28236 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.2□□□□□ -0.3
Gja8P28236 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.2□□□□□ -0.3
Gja8P28236 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gja8P28236 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.2□□□□□ -0.3
Gja8P28236 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gja8P28236 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gja8P28236 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gja8P28236 Gm13351-201ENSMUST00000118087 414 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Gm15004-201ENSMUST00000119192 630 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Gm4310-201ENSMUST00000177847 889 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Gm9507-202ENSMUST00000180157 654 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.19□□□□□ -0.3
Gja8P28236 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Gm8342-201ENSMUST00000209839 757 ntBASIC13.19□□□□□ -0.3
Gja8P28236 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.19□□□□□ -0.3
Gja8P28236 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Gja8P28236 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gja8P28236 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gja8P28236 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.19□□□□□ -0.3
Gja8P28236 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.19□□□□□ -0.3
Gja8P28236 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gja8P28236 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.18□□□□□ -0.3
Gja8P28236 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gja8P28236 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.18□□□□□ -0.3
Gja8P28236 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.18□□□□□ -0.3
Gja8P28236 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.18□□□□□ -0.3
Gja8P28236 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.18□□□□□ -0.3
Gja8P28236 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja8P28236 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.18□□□□□ -0.3
Gja8P28236 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gja8P28236 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms