Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm23218-201ENSMUST00000158124 276 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm25604-201ENSMUST00000158359 133 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm20495-201ENSMUST00000173902 235 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Mir6407-201ENSMUST00000184510 101 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm37826-201ENSMUST00000195329 322 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm3793-201ENSMUST00000204973 672 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm3619-201ENSMUST00000219947 775 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxd8P23463 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxd8P23463 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.2□□□□□ -0.46
Hoxd8P23463 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm15549-201ENSMUST00000121595 622 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm25492-201ENSMUST00000157383 129 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm29410-201ENSMUST00000188383 694 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm5708-201ENSMUST00000196289 886 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxd8P23463 AC132881.2-201ENSMUST00000225474 709 ntBASIC12.19□□□□□ -0.46
Hoxd8P23463 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxd8P23463 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxd8P23463 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Hoxd8P23463 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.18□□□□□ -0.46
Hoxd8P23463 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.18□□□□□ -0.46
Hoxd8P23463 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxd8P23463 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms