Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.72□□□□□ -0.69
Cbx3P23198 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cbx3P23198 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cbx3P23198 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cbx3P23198 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.72□□□□□ -0.69
Cbx3P23198 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cbx3P23198 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.72□□□□□ -0.69
Cbx3P23198 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cbx3P23198 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Gm16202-201ENSMUST00000117532 544 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Cbx3P23198 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Mir6977-201ENSMUST00000184960 64 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Cbx3P23198 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.71□□□□□ -0.69
Cbx3P23198 Gm44397-201ENSMUST00000195950 113 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.71□□□□□ -0.69
Cbx3P23198 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Cbx3P23198 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Cbx3P23198 Gm6983-201ENSMUST00000214912 628 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Itm2b-204ENSMUST00000228637 783 ntBASIC10.71□□□□□ -0.69
Cbx3P23198 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Cbx3P23198 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cbx3P23198 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.71□□□□□ -0.7
Cbx3P23198 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cbx3P23198 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cbx3P23198 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cbx3P23198 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cbx3P23198 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.7□□□□□ -0.7
Cbx3P23198 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.7□□□□□ -0.7
Cbx3P23198 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cbx3P23198 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.7□□□□□ -0.7
Cbx3P23198 Gm6458-201ENSMUST00000211573 635 ntBASIC10.7□□□□□ -0.7
Cbx3P23198 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.7□□□□□ -0.7
Cbx3P23198 Gm6218-201ENSMUST00000219812 628 ntBASIC10.7□□□□□ -0.7
Cbx3P23198 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Gm42741-201ENSMUST00000201340 2278 ntBASIC10.7□□□□□ -0.7
Cbx3P23198 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cbx3P23198 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms