Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Gm18753-201ENSMUST00000201000 566 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 Gm43962-201ENSMUST00000203898 190 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Gm45258-201ENSMUST00000210042 853 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Hoxd3P09027 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 AC159886.1-201ENSMUST00000217099 1091 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Hoxd3P09027 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Hoxd3P09027 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Hoxd3P09027 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Paupar-201ENSMUST00000194826 3482 ntBASIC9.42□□□□□ -0.9
Hoxd3P09027 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Hoxd3P09027 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Hoxd3P09027 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxd3P09027 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm15515-201ENSMUST00000117827 822 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm12266-201ENSMUST00000120311 962 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm1848-201ENSMUST00000120711 789 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm12978-201ENSMUST00000121250 522 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm5616-201ENSMUST00000165252 384 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm8741-201ENSMUST00000174736 384 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm28064-201ENSMUST00000185639 858 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm37666-201ENSMUST00000194110 866 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm42430-201ENSMUST00000197209 616 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm43138-201ENSMUST00000199123 708 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm18711-201ENSMUST00000199341 750 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm34701-202ENSMUST00000204685 360 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.41□□□□□ -0.9
Hoxd3P09027 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxd3P09027 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxd3P09027 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms