Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
H2afb2S4R1M3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.58■□□□□ 0.88
H2afb2S4R1M3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb2S4R1M3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.57■□□□□ 0.88
H2afb2S4R1M3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb2S4R1M3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb2S4R1M3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb2S4R1M3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.55■□□□□ 0.88
H2afb2S4R1M3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb2S4R1M3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.54■□□□□ 0.88
H2afb2S4R1M3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb2S4R1M3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
H2afb2S4R1M3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.52■□□□□ 0.88
H2afb2S4R1M3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.52■□□□□ 0.88
H2afb2S4R1M3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.52■□□□□ 0.88
H2afb2S4R1M3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb2S4R1M3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
H2afb2S4R1M3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb2S4R1M3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.5■□□□□ 0.87
H2afb2S4R1M3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb2S4R1M3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb2S4R1M3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb2S4R1M3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.5■□□□□ 0.87
H2afb2S4R1M3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb2S4R1M3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb2S4R1M3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb2S4R1M3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H2afb2S4R1M3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
H2afb2S4R1M3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms