Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Phf1Q9Z1B8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Phf1Q9Z1B8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Phf1Q9Z1B8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Phf1Q9Z1B8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Phf1Q9Z1B8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Phf1Q9Z1B8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.83■□□□□ 0.6
Phf1Q9Z1B8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Phf1Q9Z1B8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Phf1Q9Z1B8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Phf1Q9Z1B8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Gm12922-201ENSMUST00000120626 809 ntBASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Phf1Q9Z1B8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.78■□□□□ 0.6
Phf1Q9Z1B8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Phf1Q9Z1B8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Phf1Q9Z1B8 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Phf1Q9Z1B8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phf1Q9Z1B8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phf1Q9Z1B8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phf1Q9Z1B8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Phf1Q9Z1B8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.75■□□□□ 0.59
Phf1Q9Z1B8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms