Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClcnkaQ9WUB7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ClcnkaQ9WUB7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.61
ClcnkaQ9WUB7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ClcnkaQ9WUB7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ClcnkaQ9WUB7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClcnkaQ9WUB7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ClcnkaQ9WUB7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClcnkaQ9WUB7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClcnkaQ9WUB7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClcnkaQ9WUB7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClcnkaQ9WUB7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms