Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Col13a1Q9R1N9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col13a1Q9R1N9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col13a1Q9R1N9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col13a1Q9R1N9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col13a1Q9R1N9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Gm9870-201ENSMUST00000063874 645 ntBASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col13a1Q9R1N9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col13a1Q9R1N9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col13a1Q9R1N9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col13a1Q9R1N9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col13a1Q9R1N9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Col13a1Q9R1N9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms