Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
Tubd1Q9R1K7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubd1Q9R1K7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubd1Q9R1K7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubd1Q9R1K7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubd1Q9R1K7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tubd1Q9R1K7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tubd1Q9R1K7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Tubd1Q9R1K7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Tubd1Q9R1K7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Tubd1Q9R1K7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Tubd1Q9R1K7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubd1Q9R1K7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubd1Q9R1K7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubd1Q9R1K7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubd1Q9R1K7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.02■□□□□ 0.96
Tubd1Q9R1K7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tubd1Q9R1K7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubd1Q9R1K7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tubd1Q9R1K7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tubd1Q9R1K7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21■□□□□ 0.95
Tubd1Q9R1K7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tubd1Q9R1K7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubd1Q9R1K7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms