Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.59■□□□□ 0.73
Ube4bQ9ES00 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube4bQ9ES00 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ube4bQ9ES00 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube4bQ9ES00 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube4bQ9ES00 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube4bQ9ES00 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4bQ9ES00 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4bQ9ES00 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4bQ9ES00 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4bQ9ES00 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube4bQ9ES00 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube4bQ9ES00 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Gm6311-201ENSMUST00000073790 878 ntBASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.53■□□□□ 0.72
Ube4bQ9ES00 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4bQ9ES00 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube4bQ9ES00 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4bQ9ES00 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4bQ9ES00 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms