Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1eQ9CZQ6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Raet1eQ9CZQ6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1eQ9CZQ6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1eQ9CZQ6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Raet1eQ9CZQ6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.05■□□□□ 0.48
Raet1eQ9CZQ6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1eQ9CZQ6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.03■□□□□ 0.48
Raet1eQ9CZQ6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.02■□□□□ 0.48
Raet1eQ9CZQ6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.02■□□□□ 0.47
Raet1eQ9CZQ6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1eQ9CZQ6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.01■□□□□ 0.47
Raet1eQ9CZQ6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raet1eQ9CZQ6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms