Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chd1lQ9CXF7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chd1lQ9CXF7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chd1lQ9CXF7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chd1lQ9CXF7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Chd1lQ9CXF7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Gm6311-201ENSMUST00000073790 878 ntBASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1lQ9CXF7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1lQ9CXF7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Chd1lQ9CXF7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1lQ9CXF7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.16■■□□□ 1.3
Chd1lQ9CXF7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1lQ9CXF7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 Scarna2-201ENSMUST00000157560 414 ntBASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 Gm16437-201ENSMUST00000025669 507 ntBASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd1lQ9CXF7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms