Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Otud1Q9CUB6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Gm7143-201ENSMUST00000222811 859 ntBASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otud1Q9CUB6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otud1Q9CUB6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otud1Q9CUB6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Otud1Q9CUB6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Otud1Q9CUB6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Otud1Q9CUB6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otud1Q9CUB6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Otud1Q9CUB6 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.39■□□□□ 0.69
Otud1Q9CUB6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Otud1Q9CUB6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.39■□□□□ 0.69
Otud1Q9CUB6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otud1Q9CUB6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.38■□□□□ 0.69
Otud1Q9CUB6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otud1Q9CUB6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.36■□□□□ 0.69
Otud1Q9CUB6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otud1Q9CUB6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otud1Q9CUB6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otud1Q9CUB6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otud1Q9CUB6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Otud1Q9CUB6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms