Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.94■□□□□ 0.78
Trim16Q99PP9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim16Q99PP9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.94■□□□□ 0.78
Trim16Q99PP9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.94■□□□□ 0.78
Trim16Q99PP9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim16Q99PP9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.93■□□□□ 0.78
Trim16Q99PP9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim16Q99PP9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Trim16Q99PP9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim16Q99PP9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim16Q99PP9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Trim16Q99PP9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim16Q99PP9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim16Q99PP9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.91■□□□□ 0.78
Trim16Q99PP9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim16Q99PP9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.9■□□□□ 0.78
Trim16Q99PP9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Trim16Q99PP9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.89■□□□□ 0.77
Trim16Q99PP9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim16Q99PP9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim16Q99PP9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim16Q99PP9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.88■□□□□ 0.77
Trim16Q99PP9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim16Q99PP9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim16Q99PP9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.88■□□□□ 0.77
Trim16Q99PP9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim16Q99PP9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim16Q99PP9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim16Q99PP9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.86■□□□□ 0.77
Trim16Q99PP9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim16Q99PP9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim16Q99PP9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim16Q99PP9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim16Q99PP9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms