Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab28Q99KL7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab28Q99KL7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
Rab28Q99KL7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab28Q99KL7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Rab28Q99KL7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab28Q99KL7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.89■□□□□ 0.77
Rab28Q99KL7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.89■□□□□ 0.77
Rab28Q99KL7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab28Q99KL7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
Rab28Q99KL7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rab28Q99KL7 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.88■□□□□ 0.77
Rab28Q99KL7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab28Q99KL7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab28Q99KL7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab28Q99KL7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab28Q99KL7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rab28Q99KL7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.85■□□□□ 0.77
Rab28Q99KL7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab28Q99KL7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.84■□□□□ 0.77
Rab28Q99KL7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.84■□□□□ 0.77
Rab28Q99KL7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab28Q99KL7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rab28Q99KL7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.83■□□□□ 0.77
Rab28Q99KL7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rab28Q99KL7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.83■□□□□ 0.77
Rab28Q99KL7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.83■□□□□ 0.77
Rab28Q99KL7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rab28Q99KL7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab28Q99KL7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab28Q99KL7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.81■□□□□ 0.76
Rab28Q99KL7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Rab28Q99KL7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms