Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm9Q96EQ9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm9Q96EQ9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm9Q96EQ9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prdm9Q96EQ9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm9Q96EQ9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm9Q96EQ9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Gm27454-201ENSMUST00000185090 204 ntBASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm9Q96EQ9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm9Q96EQ9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm9Q96EQ9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm9Q96EQ9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm9Q96EQ9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm9Q96EQ9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm9Q96EQ9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prdm9Q96EQ9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm9Q96EQ9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm9Q96EQ9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms