Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdha11Q91Y19 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.61■■□□□ 1.05
Pcdha11Q91Y19 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha11Q91Y19 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdha11Q91Y19 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha11Q91Y19 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha11Q91Y19 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha11Q91Y19 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdha11Q91Y19 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdha11Q91Y19 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha11Q91Y19 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Pcdha11Q91Y19 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha11Q91Y19 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Gm21956-201ENSMUST00000179946 522 ntBASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdha11Q91Y19 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha11Q91Y19 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha11Q91Y19 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdha11Q91Y19 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdha11Q91Y19 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms