Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha6Q91Y14 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha6Q91Y14 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha6Q91Y14 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha6Q91Y14 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha6Q91Y14 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha6Q91Y14 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdha6Q91Y14 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha6Q91Y14 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha6Q91Y14 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha6Q91Y14 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha6Q91Y14 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha6Q91Y14 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha6Q91Y14 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha6Q91Y14 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha6Q91Y14 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha6Q91Y14 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms