Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Gm15820-201ENSMUST00000201566 728 ntBASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb1Q91Y08 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb1Q91Y08 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb1Q91Y08 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb1Q91Y08 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb1Q91Y08 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.38■■□□□ 1.01
Pcdhb1Q91Y08 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb1Q91Y08 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Gm15546-201ENSMUST00000122095 826 ntBASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb1Q91Y08 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Pcdhb1Q91Y08 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb1Q91Y08 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb1Q91Y08 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb1Q91Y08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb1Q91Y08 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb1Q91Y08 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Pcdhb1Q91Y08 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb1Q91Y08 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.31■■□□□ 1
Pcdhb1Q91Y08 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb1Q91Y08 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb1Q91Y08 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms