Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Gm10232-201ENSMUST00000089221 720 ntBASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga3Q91XY5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga3Q91XY5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga3Q91XY5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga3Q91XY5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga3Q91XY5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga3Q91XY5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga3Q91XY5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga3Q91XY5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga3Q91XY5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga3Q91XY5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga3Q91XY5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Gm10399-202ENSMUST00000202768 748 ntBASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga3Q91XY5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms