Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb11Q91UZ8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb11Q91UZ8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhb11Q91UZ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb11Q91UZ8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb11Q91UZ8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhb11Q91UZ8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb11Q91UZ8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb11Q91UZ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhb11Q91UZ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb11Q91UZ8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb11Q91UZ8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb11Q91UZ8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb11Q91UZ8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb11Q91UZ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb11Q91UZ8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb11Q91UZ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb11Q91UZ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb11Q91UZ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb11Q91UZ8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb11Q91UZ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb11Q91UZ8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb11Q91UZ8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb11Q91UZ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb11Q91UZ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms