Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdt1Q8R4E9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdt1Q8R4E9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdt1Q8R4E9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdt1Q8R4E9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cdt1Q8R4E9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdt1Q8R4E9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdt1Q8R4E9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdt1Q8R4E9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdt1Q8R4E9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdt1Q8R4E9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdt1Q8R4E9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms