Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Atf7Q8R0S1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Atf7Q8R0S1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Gm15546-201ENSMUST00000122095 826 ntBASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Atf7Q8R0S1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atf7Q8R0S1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atf7Q8R0S1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.29■■□□□ 1.48
Atf7Q8R0S1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Atf7Q8R0S1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atf7Q8R0S1 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.28■■□□□ 1.48
Atf7Q8R0S1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.28■■□□□ 1.48
Atf7Q8R0S1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atf7Q8R0S1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Atf7Q8R0S1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Atf7Q8R0S1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Atf7Q8R0S1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
Atf7Q8R0S1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.27■■□□□ 1.48
Atf7Q8R0S1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atf7Q8R0S1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Atf7Q8R0S1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.26■■□□□ 1.47
Atf7Q8R0S1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atf7Q8R0S1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atf7Q8R0S1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Atf7Q8R0S1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atf7Q8R0S1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atf7Q8R0S1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atf7Q8R0S1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Atf7Q8R0S1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Atf7Q8R0S1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Atf7Q8R0S1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Atf7Q8R0S1 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atf7Q8R0S1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atf7Q8R0S1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atf7Q8R0S1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atf7Q8R0S1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atf7Q8R0S1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf7Q8R0S1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms