Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Gm11175-201ENSMUST00000116172 543 ntBASIC16.88■□□□□ 0.29
Rpp21Q8R040 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.88■□□□□ 0.29
Rpp21Q8R040 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rpp21Q8R040 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rpp21Q8R040 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp21Q8R040 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp21Q8R040 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.86■□□□□ 0.29
Rpp21Q8R040 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp21Q8R040 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.85■□□□□ 0.29
Rpp21Q8R040 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rpp21Q8R040 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp21Q8R040 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.84■□□□□ 0.29
Rpp21Q8R040 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp21Q8R040 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpp21Q8R040 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Gm10420-201ENSMUST00000121713 882 ntBASIC16.83■□□□□ 0.28
Rpp21Q8R040 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp21Q8R040 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.82■□□□□ 0.28
Rpp21Q8R040 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.82■□□□□ 0.28
Rpp21Q8R040 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp21Q8R040 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpp21Q8R040 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms