Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.39■■□□□ 1.98
Ddx54Q8K4L0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC27.39■■□□□ 1.98
Ddx54Q8K4L0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
Ddx54Q8K4L0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Gm43530-201ENSMUST00000195920 274 ntBASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Gm44949-201ENSMUST00000206423 1450 ntBASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx54Q8K4L0 Nespas-201ENSMUST00000143738 1083 ntBASIC27.35■■□□□ 1.97
Ddx54Q8K4L0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 Gm12933-201ENSMUST00000120203 872 ntBASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Ddx54Q8K4L0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Gm10653-202ENSMUST00000139570 835 ntBASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms