Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.39■■□□□ 1.98
Ddx54Q8K4L0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC27.39■■□□□ 1.98
Ddx54Q8K4L0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
Ddx54Q8K4L0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Gm43530-201ENSMUST00000195920 274 ntBASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx54Q8K4L0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx54Q8K4L0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Gm44949-201ENSMUST00000206423 1450 ntBASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
Ddx54Q8K4L0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx54Q8K4L0 Nespas-201ENSMUST00000143738 1083 ntBASIC27.35■■□□□ 1.97
Ddx54Q8K4L0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx54Q8K4L0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 Gm12933-201ENSMUST00000120203 872 ntBASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx54Q8K4L0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC27.32■■□□□ 1.96
Ddx54Q8K4L0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx54Q8K4L0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx54Q8K4L0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx54Q8K4L0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx54Q8K4L0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ddx54Q8K4L0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Ddx54Q8K4L0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Ddx54Q8K4L0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx54Q8K4L0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Ddx54Q8K4L0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx54Q8K4L0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Gm10653-202ENSMUST00000139570 835 ntBASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Ddx54Q8K4L0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms