Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col23a1Q8K4G2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Col23a1Q8K4G2 Gm12933-201ENSMUST00000120203 872 ntBASIC25.56■■□□□ 1.68
Col23a1Q8K4G2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col23a1Q8K4G2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col23a1Q8K4G2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.56■■□□□ 1.68
Col23a1Q8K4G2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col23a1Q8K4G2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col23a1Q8K4G2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col23a1Q8K4G2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Col23a1Q8K4G2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col23a1Q8K4G2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Nespas-201ENSMUST00000143738 1083 ntBASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col23a1Q8K4G2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col23a1Q8K4G2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Gm44949-201ENSMUST00000206423 1450 ntBASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col23a1Q8K4G2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col23a1Q8K4G2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col23a1Q8K4G2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.48■■□□□ 1.67
Col23a1Q8K4G2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col23a1Q8K4G2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col23a1Q8K4G2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Col23a1Q8K4G2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Col23a1Q8K4G2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col23a1Q8K4G2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col23a1Q8K4G2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Col23a1Q8K4G2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col23a1Q8K4G2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Col23a1Q8K4G2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col23a1Q8K4G2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Col23a1Q8K4G2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Col23a1Q8K4G2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col23a1Q8K4G2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col23a1Q8K4G2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col23a1Q8K4G2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.43■■□□□ 1.66
Col23a1Q8K4G2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Col23a1Q8K4G2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Col23a1Q8K4G2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col23a1Q8K4G2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms