Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lin28aQ8K3Y3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.17■□□□□ 0.66
Lin28aQ8K3Y3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lin28aQ8K3Y3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.17■□□□□ 0.66
Lin28aQ8K3Y3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lin28aQ8K3Y3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
Lin28aQ8K3Y3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lin28aQ8K3Y3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lin28aQ8K3Y3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lin28aQ8K3Y3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lin28aQ8K3Y3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lin28aQ8K3Y3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lin28aQ8K3Y3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lin28aQ8K3Y3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lin28aQ8K3Y3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lin28aQ8K3Y3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lin28aQ8K3Y3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Lin28aQ8K3Y3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Gm15039-201ENSMUST00000118914 875 ntBASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lin28aQ8K3Y3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Gm7143-201ENSMUST00000222811 859 ntBASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lin28aQ8K3Y3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lin28aQ8K3Y3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms