Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Golph3-205ENSMUST00000228671 2842 ntBASIC12.81□□□□□ -0.36
Cystm1Q8K353 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Gm14523-201ENSMUST00000117260 558 ntBASIC12.8□□□□□ -0.36
Cystm1Q8K353 Gm7332-201ENSMUST00000118351 454 ntBASIC12.8□□□□□ -0.36
Cystm1Q8K353 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cystm1Q8K353 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cystm1Q8K353 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cystm1Q8K353 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cystm1Q8K353 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Gm4419-202ENSMUST00000226239 1431 ntBASIC12.78□□□□□ -0.36
Cystm1Q8K353 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cystm1Q8K353 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cystm1Q8K353 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cystm1Q8K353 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cystm1Q8K353 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Cystm1Q8K353 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cystm1Q8K353 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cystm1Q8K353 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms