Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc47a1Q8K0H1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc47a1Q8K0H1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Slc47a1Q8K0H1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc47a1Q8K0H1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc47a1Q8K0H1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc47a1Q8K0H1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc47a1Q8K0H1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc47a1Q8K0H1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc47a1Q8K0H1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc47a1Q8K0H1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc47a1Q8K0H1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc47a1Q8K0H1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc47a1Q8K0H1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.08■□□□□ 0.8
Slc47a1Q8K0H1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc47a1Q8K0H1 Gm15039-201ENSMUST00000118914 875 ntBASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc47a1Q8K0H1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc47a1Q8K0H1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc47a1Q8K0H1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms