Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab43Q8CG50 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Rab43Q8CG50 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rab43Q8CG50 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab43Q8CG50 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab43Q8CG50 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rab43Q8CG50 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.08■□□□□ 0.81
Rab43Q8CG50 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab43Q8CG50 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.08■□□□□ 0.81
Rab43Q8CG50 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Rab43Q8CG50 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rab43Q8CG50 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Rab43Q8CG50 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.07■□□□□ 0.8
Rab43Q8CG50 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab43Q8CG50 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab43Q8CG50 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab43Q8CG50 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab43Q8CG50 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab43Q8CG50 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Gm43530-201ENSMUST00000195920 274 ntBASIC20.04■□□□□ 0.8
Rab43Q8CG50 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab43Q8CG50 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.03■□□□□ 0.8
Rab43Q8CG50 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab43Q8CG50 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab43Q8CG50 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab43Q8CG50 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab43Q8CG50 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
Rab43Q8CG50 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab43Q8CG50 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20■□□□□ 0.79
Rab43Q8CG50 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rab43Q8CG50 Gm7160-202ENSMUST00000188519 1027 ntBASIC20■□□□□ 0.79
Rab43Q8CG50 Gm43173-201ENSMUST00000202246 593 ntBASIC20■□□□□ 0.79
Rab43Q8CG50 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20■□□□□ 0.79
Rab43Q8CG50 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab43Q8CG50 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.99■□□□□ 0.79
Rab43Q8CG50 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab43Q8CG50 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab43Q8CG50 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rab43Q8CG50 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab43Q8CG50 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
Rab43Q8CG50 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab43Q8CG50 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Rab43Q8CG50 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms