Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smc5Q8CG46 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc5Q8CG46 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc5Q8CG46 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc5Q8CG46 Golph3-202ENSMUST00000226517 2359 ntBASIC25.59■■□□□ 1.69
Smc5Q8CG46 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.58■■□□□ 1.69
Smc5Q8CG46 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc5Q8CG46 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Smc5Q8CG46 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Smc5Q8CG46 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
Smc5Q8CG46 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Smc5Q8CG46 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Smc5Q8CG46 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc5Q8CG46 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.57■■□□□ 1.68
Smc5Q8CG46 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Smc5Q8CG46 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Smc5Q8CG46 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Smc5Q8CG46 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc5Q8CG46 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc5Q8CG46 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc5Q8CG46 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Mir6538-201ENSMUST00000183713 110 ntBASIC25.53■■□□□ 1.68
Smc5Q8CG46 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smc5Q8CG46 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Smc5Q8CG46 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.52■■□□□ 1.68
Smc5Q8CG46 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Smc5Q8CG46 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Smc5Q8CG46 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Smc5Q8CG46 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smc5Q8CG46 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Smc5Q8CG46 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.51■■□□□ 1.67
Smc5Q8CG46 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.5■■□□□ 1.67
Smc5Q8CG46 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc5Q8CG46 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.49■■□□□ 1.67
Smc5Q8CG46 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc5Q8CG46 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc5Q8CG46 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc5Q8CG46 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Smc5Q8CG46 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smc5Q8CG46 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 338.1 ms