Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shisa4Q8CA71 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shisa4Q8CA71 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shisa4Q8CA71 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.18■■□□□ 1.46
Shisa4Q8CA71 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shisa4Q8CA71 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Shisa4Q8CA71 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shisa4Q8CA71 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Shisa4Q8CA71 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Gm7143-201ENSMUST00000222811 859 ntBASIC24.16■■□□□ 1.46
Shisa4Q8CA71 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shisa4Q8CA71 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Gm9870-201ENSMUST00000063874 645 ntBASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shisa4Q8CA71 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Shisa4Q8CA71 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.14■■□□□ 1.45
Shisa4Q8CA71 Gm21956-201ENSMUST00000179946 522 ntBASIC24.14■■□□□ 1.45
Shisa4Q8CA71 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Shisa4Q8CA71 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Shisa4Q8CA71 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shisa4Q8CA71 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shisa4Q8CA71 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.12■■□□□ 1.45
Shisa4Q8CA71 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shisa4Q8CA71 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Shisa4Q8CA71 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shisa4Q8CA71 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Shisa4Q8CA71 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Shisa4Q8CA71 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Shisa4Q8CA71 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shisa4Q8CA71 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Shisa4Q8CA71 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Gm12922-201ENSMUST00000120626 809 ntBASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shisa4Q8CA71 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Golgb1-201ENSMUST00000023534 498 ntBASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shisa4Q8CA71 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms