Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Usp44Q8C2S0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Usp44Q8C2S0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Usp44Q8C2S0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Usp44Q8C2S0 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Usp44Q8C2S0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Usp44Q8C2S0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Usp44Q8C2S0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Usp44Q8C2S0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Usp44Q8C2S0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Usp44Q8C2S0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.21■■□□□ 1.47
Usp44Q8C2S0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.21■■□□□ 1.47
Usp44Q8C2S0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Usp44Q8C2S0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Usp44Q8C2S0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Usp44Q8C2S0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Usp44Q8C2S0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp44Q8C2S0 Gm9870-201ENSMUST00000063874 645 ntBASIC24.18■■□□□ 1.46
Usp44Q8C2S0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp44Q8C2S0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Usp44Q8C2S0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Usp44Q8C2S0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Usp44Q8C2S0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Usp44Q8C2S0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Usp44Q8C2S0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
Usp44Q8C2S0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp44Q8C2S0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Usp44Q8C2S0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp44Q8C2S0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms