Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tsen54Q8C2A2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tsen54Q8C2A2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.03■□□□□ 0.32
Tsen54Q8C2A2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Gm7332-201ENSMUST00000118351 454 ntBASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.02■□□□□ 0.32
Tsen54Q8C2A2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Tsen54Q8C2A2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.02■□□□□ 0.31
Tsen54Q8C2A2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tsen54Q8C2A2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.01■□□□□ 0.31
Tsen54Q8C2A2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 AC117769.4-201ENSMUST00000225679 685 ntBASIC17■□□□□ 0.31
Tsen54Q8C2A2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tsen54Q8C2A2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.99■□□□□ 0.31
Tsen54Q8C2A2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tsen54Q8C2A2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms