Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.26■□□□□ 0.99
Trub1Q8C0D0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.26■□□□□ 0.99
Trub1Q8C0D0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trub1Q8C0D0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trub1Q8C0D0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trub1Q8C0D0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Trub1Q8C0D0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trub1Q8C0D0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trub1Q8C0D0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Gm15546-201ENSMUST00000122095 826 ntBASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trub1Q8C0D0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.22■□□□□ 0.99
Trub1Q8C0D0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trub1Q8C0D0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.21■□□□□ 0.99
Trub1Q8C0D0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.2■□□□□ 0.98
Trub1Q8C0D0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trub1Q8C0D0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trub1Q8C0D0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trub1Q8C0D0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trub1Q8C0D0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.18■□□□□ 0.98
Trub1Q8C0D0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trub1Q8C0D0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trub1Q8C0D0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trub1Q8C0D0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trub1Q8C0D0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms