Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf7Q8BTV2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf7Q8BTV2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf7Q8BTV2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf7Q8BTV2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cpsf7Q8BTV2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf7Q8BTV2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf7Q8BTV2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf7Q8BTV2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf7Q8BTV2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf7Q8BTV2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf7Q8BTV2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf7Q8BTV2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Gm14523-201ENSMUST00000117260 558 ntBASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf7Q8BTV2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf7Q8BTV2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf7Q8BTV2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf7Q8BTV2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf7Q8BTV2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf7Q8BTV2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf7Q8BTV2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Cpsf7Q8BTV2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf7Q8BTV2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf7Q8BTV2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms