Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lig4Q8BTF7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lig4Q8BTF7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Gm21956-201ENSMUST00000179946 522 ntBASIC21.75■■□□□ 1.07
Lig4Q8BTF7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Lig4Q8BTF7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lig4Q8BTF7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lig4Q8BTF7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lig4Q8BTF7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Lig4Q8BTF7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lig4Q8BTF7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lig4Q8BTF7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lig4Q8BTF7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Lig4Q8BTF7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Lig4Q8BTF7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Lig4Q8BTF7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.69■■□□□ 1.06
Lig4Q8BTF7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lig4Q8BTF7 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.67■■□□□ 1.06
Lig4Q8BTF7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lig4Q8BTF7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lig4Q8BTF7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms