Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smco3Q8BQM7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Smco3Q8BQM7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco3Q8BQM7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smco3Q8BQM7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Smco3Q8BQM7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smco3Q8BQM7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smco3Q8BQM7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Smco3Q8BQM7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Gm44428-201ENSMUST00000204474 874 ntBASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Gm7432-201ENSMUST00000210343 879 ntBASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Iqck-206ENSMUST00000208658 2891 ntBASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smco3Q8BQM7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Gm11599-201ENSMUST00000118720 878 ntBASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.8■□□□□ 0.28
Smco3Q8BQM7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco3Q8BQM7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.78■□□□□ 0.28
Smco3Q8BQM7 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco3Q8BQM7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms